Insertion junction: LMJ.RY0402.241637_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.241637
Chromosome:chromosome 1
Location:3661405
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g023600 (1 of 8) PTHR10366:SF411 - HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTTATAGTACAGTTGATCACAAGTAAC
Internal bar code:CTATATTCTTACGGCGTTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:90.046
LEAP-Seq n confirming:1565
LEAP-Seq n nonconfirming:173
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTCACAGACCTGGTGTA
Suggested primer 2:TCGGCTGCTAGATAGCTGGT