Insertion junction: LMJ.RY0402.241735_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.241735
Chromosome:chromosome 13
Location:455944
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGGATTGGATAACGGAAAGGGAAGTGG
Internal bar code:TCACCAAGAGAGCCTAGCCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:335
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTGGCATGTCGTAGCCC
Suggested primer 2:ACATCTCCGTATCTCCACCG