Insertion junction: LMJ.RY0402.241894_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.241894
Chromosome:chromosome 1
Location:5047226
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTTACTGTGTCGGCTGAAGTTGATGGG
Internal bar code:CCGTCAAACCAACCACGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:98
LEAP-Seq percent confirming:84.3137
LEAP-Seq n confirming:473
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTAGGAAGGTCAGGGGC
Suggested primer 2:CGTCCTTGATGCTCTTGTCA