Insertion junction: LMJ.RY0402.241917_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.241917
Chromosome:chromosome 4
Location:3486881
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g227900 PF20 WD-repeat protein of flagellum central pair; (1 of 6) IPR001680//IPR015943//IPR017986//IPR020472 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGTATGTGTGTTAGCAAAGCACAATGG
Internal bar code:TGGTTGTACGAGCTTTCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:353
LEAP-Seq percent confirming:99.5527
LEAP-Seq n confirming:2448
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGGAGAGAGAGCAGTT
Suggested primer 2:ACTCGAGTTTGGAAGAGCCA