Insertion junction: LMJ.RY0402.242268_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.242268
Chromosome:chromosome 7
Location:2429170
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g328900 CDPK3,CDPK9 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGGCGCTGACCACGCAGTCTCGAGGC
Internal bar code:CGTGGGTGGTATAGTCGTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:191
LEAP-Seq percent confirming:83.0986
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGACAACCGATTAGCCCA
Suggested primer 2:ATACATCCTGCTGTCGGGTC