Insertion junction: LMJ.RY0402.242281_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.242281
Chromosome:chromosome 3
Location:4354408
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g175100 (1 of 1) IPR013750//IPR016035 - GHMP kinase, C-terminal domain // Acyl transferase/acyl hydrolase/lysophospholipase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTGTTTCAGCATTATAACTTCGGTTGT
Internal bar code:ATAAAGTGTCGTTCCGCACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:555
LEAP-Seq percent confirming:98.9091
LEAP-Seq n confirming:544
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTACCGACCCTGTTACG
Suggested primer 2:ATAAATGACCCCCTCCCAAG