Insertion junction: LMJ.RY0402.242283_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.242283
Chromosome:chromosome 14
Location:1651329
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g619100 CLPR1 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGTGGCATGCGCGTCTGTGGCCGCAC
Internal bar code:CATGCAGGGGCAGATAGAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:471
LEAP-Seq percent confirming:87.5878
LEAP-Seq n confirming:374
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTTAGTTTGGGCTGG
Suggested primer 2:CTAAGGGAGGTAAGCCCCAG