Insertion junction: LMJ.RY0402.242283_4

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.242283
Chromosome:chromosome 14
Location:1651340
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g619100 CLPR1 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCCTGCCTGTGGCGTGCAGGCAAGCAT
Internal bar code:AGGGGTTGGGTTAACGCTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:90.1841
LEAP-Seq n confirming:147
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTTAGTTTGGGCTGG
Suggested primer 2:CTAAGGGAGGTAAGCCCCAG