Insertion junction: LMJ.RY0402.242371_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.242371
Chromosome:chromosome 1
Location:3757512
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g024250 HEL4 DEAH box ATP-dependent RNA helicase; (1 of 1) 1.14.13.101 - Senecionine N-oxygenase / Senecionine monooxygenase (N-oxide-forming) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAAGCTCTGTTTCCTCACAGCCATGTT
Internal bar code:GAGCCCCGGGGCTGTAGGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:98.7879
LEAP-Seq n confirming:163
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCTTTATGTTGGCGTG
Suggested primer 2:GACAAGATGCCCACCAAGTT