Insertion junction: LMJ.RY0402.242521_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.242521
Chromosome:chromosome 9
Location:5853615
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g402293 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTCTGATGGAGATTGAAAGGGTCTCAG
Internal bar code:CGTTGAAGCGCTAGCGGACGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:89.9083
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATGCAACACCGTATTC
Suggested primer 2:GTGTGCGCTTATGCGATCTA