Insertion junction: LMJ.RY0402.242564_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.242564
Chromosome:chromosome 17
Location:358360
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g698550 (1 of 6) IPR000104//IPR000719//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCTGACCATACGCGCCGCTGCCGGCT
Internal bar code:ATAATGCTTGGACTCAGCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:98.5876
LEAP-Seq n confirming:698
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCACCACATGAGTTGGC
Suggested primer 2:GCTATCCAAATGGTTTGCGT