Insertion junction: LMJ.RY0402.242651_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.242651
Chromosome:chromosome 5
Location:3069784
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g238935 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTATCAAAACGTCGTCTTCAGATTCCAC
Internal bar code:ATGGTATGTACTCTCGCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:393
LEAP-Seq percent confirming:99.7285
LEAP-Seq n confirming:8080
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGCATCGAAGACACGTCG
Suggested primer 2:GGGCTATTTGACGATGAGGA