Insertion junction: LMJ.RY0402.242718_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.242718
Chromosome:chromosome 5
Location:2207137
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g234654 (1 of 1) IPR002110//IPR003613//IPR013083//IPR020683 - Ankyrin repeat // U box domain // Zinc finger, RING/FYVE/PHD-type // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACACACACAACGCCGTCCAACGTCCAA
Internal bar code:CTGGTATGCGTCATTGGGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:92.4603
LEAP-Seq n confirming:233
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAACGCCTCAAAGTCTC
Suggested primer 2:CCTTACCGGATTGGTTCAGA