Insertion junction: LMJ.RY0402.242759_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.242759
Chromosome:chromosome 1
Location:2142547
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g011630 (1 of 1) IPR001283//IPR002413//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Ves allergen // Pistil-specific extensin-like protein // CAP domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGCCTACGCAACCCCTTTGCCTATCAA
Internal bar code:ATGGGCACTAAGAGAAGTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:444
LEAP-Seq percent confirming:99.8911
LEAP-Seq n confirming:917
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATATTACGCAGCAGCAG
Suggested primer 2:ATTTGACAACTGGGCTGTCC