Insertion junction: LMJ.RY0402.242821_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.242821
Chromosome:chromosome 13
Location:4603356
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g604050 (1 of 1) IPR002048//IPR006626//IPR011050 - EF-hand domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGGTGGACGACTGGACGGGCCATCAT
Internal bar code:GGTCCATTCGTAAGCATCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:98.3696
LEAP-Seq n confirming:362
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGTGTCAGGCAACACTG
Suggested primer 2:AACCGTGGGTGTATCCATGT