Insertion junction: LMJ.RY0402.243044_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.243044
Chromosome:chromosome 2
Location:3423821
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g095111 VSR1 Vacuolar Sorting Receptor; (1 of 1) PTHR22765//PTHR22765:SF56 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGGTGCAGGCGGAGCGAAGGAGCTGC
Internal bar code:GGCGTTCCTCGCGTGGGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:390
LEAP-Seq percent confirming:98.6577
LEAP-Seq n confirming:588
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGCTGCGATTGAGTGAC
Suggested primer 2:GGGTCTGGCACACAGTAGGT