Insertion junction: LMJ.RY0402.243334_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.243334
Chromosome:chromosome 17
Location:5935089
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g740261 FAP365 (1 of 96) IPR019734 - Tetratricopeptide repeat; Flagellar Associated Protein 365 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCGCTGGGTCTGAGGTTGTTATACCG
Internal bar code:AATGTCGCGCGGGTCAACGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:262
LEAP-Seq percent confirming:54.2524
LEAP-Seq n confirming:3585
LEAP-Seq n nonconfirming:3023
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTTAGTTTGGGCTGG
Suggested primer 2:GCGTGTGTGTGTGTGTGTGT