Insertion junction: LMJ.RY0402.243408_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.243408
Chromosome:chromosome 12
Location:2166424
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACGTGGTCGTGTCTGCTGTGTGCGGGG
Internal bar code:CGCGGTCCAAACAAGGCCCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:98.8478
LEAP-Seq n confirming:1630
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCACCTGCTCACAGAA
Suggested primer 2:CTGACAGGGTATCGTGGGTT