Insertion junction: LMJ.RY0402.243646_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.243646
Chromosome:chromosome 12
Location:465237
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g493500 SOX1 (1 of 1) PTHR10961 - PEROXISOMAL SARCOSINE OXIDASE; Sarcosine oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGACGCAGCAACAAAACAGTGAGGATGG
Internal bar code:GACGGATAAGCTAGTGAGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:623
LEAP-Seq percent confirming:99.4012
LEAP-Seq n confirming:830
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AACACATTGTCGACGTGCAT
Suggested primer 2:CTGCAGTCCCTCGAAGTAGG