Insertion junction: LMJ.RY0402.243752_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.243752
Chromosome:chromosome 14
Location:1937364
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g621100 (1 of 1) IPR000104//IPR001810//IPR025886 - Antifreeze protein, type I // F-box domain // Phloem protein 2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCCCATCCACCAACGCCCCTTCTCCT
Internal bar code:AGTTACCGACCCGGTATAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:113
LEAP-Seq percent confirming:36.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGTACGTGCCTGTTTTT
Suggested primer 2:ACGAGAGTGGTTGGGATTTG