Insertion junction: LMJ.RY0402.243868_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.243868
Chromosome:chromosome 9
Location:1746407
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396586 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCTGCTGTTTGGTTTATTGGTGGTTG
Internal bar code:GCTTCATGATCTGCATGGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:99.3978
LEAP-Seq n confirming:6107
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAGCTTGAAAAGCTCAC
Suggested primer 2:ATGCCGCTTGCAATTATACC