Insertion junction: LMJ.RY0402.244122_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.244122
Chromosome:chromosome_11
Location:1638751
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre11.g467770 PGK1 Phosphoglycerate kinase, chloroplast precursor antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):TTACACATCCTGCAGGCCTACGTACGGCAA
Internal bar code:GGGTCCAGGTACACTGTTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGCACGTGAACTATCC
Suggested primer 2:TGCAAAGCTTGGCTACATTG