Insertion junction: LMJ.RY0402.244151_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.244151
Chromosome:chromosome 6
Location:4812095
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278200 ROC66 (1 of 1) PTHR31319//PTHR31319:SF4 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-LIKE 3-RELATED; Rhythm Of Chloroplast 66 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCGCTCTTGTGCTGGCACTGGGTACC
Internal bar code:CTCTGGATTTTTATCGATTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:98.9715
LEAP-Seq n confirming:1251
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGACGGCGGACAGACTA
Suggested primer 2:CCTGTCCGTTATTGGCTTGT