Insertion junction: LMJ.RY0402.244256_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.244256
Chromosome:chromosome 6
Location:4933186
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g279500 CPL6 Conserved in the Plant Lineage; (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATCCTTGCTCATCATGGCGTACCACCT
Internal bar code:GATCAGCGGTGTATAGAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:98.3193
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCGTACAAGCTACACGA
Suggested primer 2:CAAGCGCGCAGTATATCAAA