Insertion junction: LMJ.RY0402.244419_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.244419
Chromosome:chromosome 1
Location:6654809
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g047700 CYN40 Cyclophilin 40; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTGAGGTGCGGGTTGCGGGCGCACCGG
Internal bar code:TTCGCTGATGCATACTTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:99.6903
LEAP-Seq n confirming:4829
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTGGTACCGTCTTTCAG
Suggested primer 2:ACACACACACACACACACGG