Insertion junction: LMJ.RY0402.244752_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.244752
Chromosome:chromosome 7
Location:3680767
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g337516 CGL75,SMM27 (1 of 1) PTHR18895//PTHR18895:SF74 - METHYLTRANSFERASE // HEMK METHYLTRANSFERASE FAMILY MEMBER 1; Conserved in the green lineage 75 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCGCAGCCGCCAGCTCCTGCAGCAGT
Internal bar code:ATCTTCTGTCGATACTACGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:99.6737
LEAP-Seq n confirming:611
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGGTTATGCCTTCAAA
Suggested primer 2:CCTTACAAAGCAGCTCCGAC