Insertion junction: LMJ.RY0402.244810_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.244810
Chromosome:chromosome 17
Location:3442348
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g724600 PAO2,TIC55-2 Pheophorbide a oxygenase-related protein; (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGGGTGAGCATGGGCCATCGGGCCTG
Internal bar code:CTGTTTTGCTCCGCAGCCCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:99.5261
LEAP-Seq n confirming:25411
LEAP-Seq n nonconfirming:121
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCATCTCAAACCCACCA
Suggested primer 2:GGAAAAGCCGTGATTGTGTT