Insertion junction: LMJ.RY0402.244865_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.244865
Chromosome:chromosome 17
Location:2972054
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g720150 (1 of 1) IPR000104//IPR008752 - Antifreeze protein, type I // Peptidase M11, gametolysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTGCACGCCTCGTGGCAACGAGAATG
Internal bar code:GACACATAGGTGTGGCCGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:99.1107
LEAP-Seq n confirming:2229
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATTCATGTTGAGGCGTG
Suggested primer 2:TGGCAGTTTTGGTGTGTTGT