Insertion junction: LMJ.RY0402.244942_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.244942
Chromosome:chromosome 16
Location:1134633
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650100 PETN Subunit of the chloroplast cytochrome b6f complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCTAACTCCAGCTGGGCTCATAGGGC
Internal bar code:TATGTACTTGTCTCGCAGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:713
LEAP-Seq percent confirming:99.2747
LEAP-Seq n confirming:8212
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCATACAAGGGGTGATGC
Suggested primer 2:TCAAACAGCAAGCACTGACC