Insertion junction: LMJ.RY0402.245017_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.245017
Chromosome:chromosome 17
Location:4387639
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g731550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCAGTACCAGCTCGAGGCAGCCTTGACG
Internal bar code:TTGATGACGAGTTAGTAGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:917
LEAP-Seq percent confirming:99.6588
LEAP-Seq n confirming:13144
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATATCTACGTGCTGGACGGC
Suggested primer 2:CCGCTACACAAGATGCTCAA