Insertion junction: LMJ.RY0402.245058_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.245058
Chromosome:chromosome 17
Location:5832218
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g739650 MAE1,MFT1 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCATTGCATACTGGACAAGTTCAAACC
Internal bar code:CACAGAACGCCTGGCTCAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:557
LEAP-Seq percent confirming:98.9813
LEAP-Seq n confirming:583
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCTACCTGCGTGAATG
Suggested primer 2:ATGGGTGTCGCTAACCTTTG