Insertion junction: LMJ.RY0402.245126_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.245126
Chromosome:chromosome 9
Location:2114786
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAATAAAAATATGTATGAAAGAAAAATG
Internal bar code:GAATATGCTTCTATAAGCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:98.2473
LEAP-Seq n confirming:5998
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCCTTACGCTCATTCAC
Suggested primer 2:CTGGTCCTGTGGGGAGAATA