Insertion junction: LMJ.RY0402.245146_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.245146
Chromosome:chromosome 16
Location:1112878
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTGTTGTGCCCTGCGCGCCACCCCGGG
Internal bar code:TGGTCCTTCAGGCAGTGTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:99.7042
LEAP-Seq n confirming:3034
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCTGTGATCAGGCTATT
Suggested primer 2:CCACTTACTGCCACCACCTT