Insertion junction: LMJ.RY0402.245197_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.245197
Chromosome:chromosome 16
Location:5659184
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g679300 CGL139 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACCGTATCACTGCCCGCGGCACTTGCC
Internal bar code:CGCAAGTGGCGGTAGTGGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:94.4272
LEAP-Seq n confirming:305
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATCAAAATCTCAGGCCC
Suggested primer 2:AATGCAGGCTCTTGTTGCTT