Insertion junction: LMJ.RY0402.245197_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.245197
Chromosome:chromosome 16
Location:5659187
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g679300 CGL139 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGTGGTCGGTGCGGCATGATGAACCAG
Internal bar code:TGGGGGACAGCGAAGAGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:414
LEAP-Seq percent confirming:92.1569
LEAP-Seq n confirming:141
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATCAAAATCTCAGGCCC
Suggested primer 2:AATGCAGGCTCTTGTTGCTT