Insertion junction: LMJ.RY0402.245404_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.245404
Chromosome:chromosome 12
Location:2111161
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g509150 (1 of 1) PTHR18937//PTHR18937:SF151 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCCTGCACTTGCCTGGTTCCTCCCGTG
Internal bar code:GGGCTTCCCTCGGACCACGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:648
LEAP-Seq percent confirming:95.9444
LEAP-Seq n confirming:4211
LEAP-Seq n nonconfirming:178
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTCACACAGGCGAAGAG
Suggested primer 2:AAGGTCTCCGGATCCAGTCT