Insertion junction: LMJ.RY0402.245493_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.245493
Chromosome:chromosome 6
Location:4359804
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278267 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAGCACAGGCCCCGCAACCCTACGTGC
Internal bar code:GCTCTCTATCACTTTATTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:99.299
LEAP-Seq n confirming:3683
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCACCGCATTACCTACT
Suggested primer 2:ATCACCGTAACGCATGAACA