Insertion junction: LMJ.RY0402.245515_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.245515
Chromosome:chromosome 4
Location:1616542
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g213150 MAE13 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATAAGAAGTAAGGCGGGGGGGTCGGGT
Internal bar code:CGCTGCGGCGCTTGGGACGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:97.8033
LEAP-Seq n confirming:1959
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCGTCACTCCGTCTTC
Suggested primer 2:CGCCATACCCAGTCAAAAGT