Insertion junction: LMJ.RY0402.245583_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.245583
Chromosome:scaffold 18
Location:202100
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre18.g749597 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTTTCCCGGAGATGATAAGTTCCTCG
Internal bar code:ATTTTTTTTAGAGTCTTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:149
LEAP-Seq percent confirming:99.6156
LEAP-Seq n confirming:6478
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCACTTGCTGTCGGCTT
Suggested primer 2:CACAAGGCTGGTTGGATCAC