Insertion junction: LMJ.RY0402.245642_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.245642
Chromosome:chromosome 3
Location:5437589
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGGAGGCTTCCTGGTGGCTGTCTTGCC
Internal bar code:AGGGATGCAAAGAGGTGGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:99.5349
LEAP-Seq n confirming:6634
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GACCACGGCTATTTGACGTT
Suggested primer 2:TAGCGATTGAGCGATACACG