Insertion junction: LMJ.RY0402.245642_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.245642
Chromosome:chromosome 3
Location:5437592
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGGGGCAAAAACAGCCGACGTCGCCAG
Internal bar code:CTCCCCGGGCCACGAGGATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:82.0742
LEAP-Seq n confirming:1195
LEAP-Seq n nonconfirming:261
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GACCACGGCTATTTGACGTT
Suggested primer 2:TAGCGATTGAGCGATACACG