Insertion junction: LMJ.RY0402.245705_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.245705
Chromosome:chromosome 4
Location:379016
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g217914 WDR65,FAP57,BOP2 (1 of 1) IPR001680//IPR011047//IPR015943//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain; Flagellar Associated Protein 57 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAACTTGCAAAGGCACCAGCGGCTTG
Internal bar code:AGTGGGTCGGCGCAATCATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:388
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:200
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTGTCCCTCATCATCC
Suggested primer 2:CTTCTCCTTGAGCACCTTGG