Insertion junction: LMJ.RY0402.245725_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.245725
Chromosome:chromosome 17
Location:5831747
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g739650 MAE1,MFT1 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTAATGACGTAATGTAAGGGGTCCTGC
Internal bar code:CACTCGTTCCCCTGTGCTGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:541
LEAP-Seq percent confirming:98.4503
LEAP-Seq n confirming:1080
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAAAGCAGTCAATGGGT
Suggested primer 2:AGATTGCTTGCTTTCGCAAT