Insertion junction: LMJ.RY0402.245760_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.245760
Chromosome:chromosome 6
Location:3161978
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGCTCCGCACACACAGCCCCAAAGAG
Internal bar code:GGAACCAATGCCGCCACGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:93.311
LEAP-Seq n confirming:279
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCAGTGACACTTTTGAG
Suggested primer 2:GGACGGGTGAATGTGGTAGT