Insertion junction: LMJ.RY0402.245875_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.245875
Chromosome:chromosome 8
Location:2530951
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g372250 YDIF1,YDIF Putative soluble chloroplast ABCF protein, related to bacterial YdiF.; (1 of 1) PTHR19211//PTHR19211:SF48 - ATP-BINDING TRANSPORT PROTEIN-RELATED // ABC TRANSPORTER F FAMILY MEMBER 2-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCGGCACTGAGCGAGCCCAACGAGTTC
Internal bar code:TGTGGGCATGAAGCGGGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:98.374
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTTTACTGAGGGCTGTT
Suggested primer 2:GCGTTACGACTTGGAATGGT