Insertion junction: LMJ.RY0402.245997_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.245997
Chromosome:chromosome 13
Location:1269777
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g570700 CHI7,CHI4 (1 of 1) IPR001002//IPR001223//IPR011583//IPR017853//IPR029070 - Chitin-binding, type 1 // Glycoside hydrolase family 18, catalytic domain // Chitinase II // Glycoside hydrolase superfamily // Chitinase insertion domain; Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATTTCTGGAGGGCGCCGTGTGTGTTTG
Internal bar code:GACATGGTTGCGTGCGCATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:199
LEAP-Seq percent confirming:96.2951
LEAP-Seq n confirming:5822
LEAP-Seq n nonconfirming:224
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGTGAGGGAGAAGGTGA
Suggested primer 2:TACGTGTGAATGGGACAGGA