Insertion junction: LMJ.RY0402.246166_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.246166
Chromosome:chromosome 3
Location:6647739
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTGCAAACCGGGCAACGGGCGCGCAAG
Internal bar code:ATGCTGTGTTGTTCACCGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:915
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:382
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGGTTGCACTGGCTAGG
Suggested primer 2:ACATAACCTTCCGCTCATCG