Insertion junction: LMJ.RY0402.246364_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.246364
Chromosome:chromosome 9
Location:2117458
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACTACATGTAAGAAAGAGCTTCGAATAC
Internal bar code:TCCTATCAGCCAGGGTGGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCCAGCAGACTAGGTG
Suggested primer 2:GTGTACTTCGGCACCTGGAT