Insertion junction: LMJ.RY0402.246616_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.246616
Chromosome:chromosome 6
Location:2362563
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g267600 LCYE,LEC1,LCYE1 (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase; lycopene epsilon cyclase, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCAAGCATGCGGTGTCGAAGGCTCAAAC
Internal bar code:GAACGAGATCCACGGAGCGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:98.1612
LEAP-Seq n confirming:694
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAAGCTGCCCAAACCAT
Suggested primer 2:TAGGTGAAGCTCCCACGTCT