Insertion junction: LMJ.RY0402.246762_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.246762
Chromosome:chromosome 7
Location:1473768
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g323550 PUS8 (1 of 2) 5.4.99.19 - 16S rRNA pseudouridine(516) synthase / 16S RNA Psi(516) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCCGGTGCTCAACGCGCGCCGCGGCCC
Internal bar code:ACGTCGTGCAGATCAGGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:622
LEAP-Seq percent confirming:99.2011
LEAP-Seq n confirming:745
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGAAGTGATGCAAGTC
Suggested primer 2:ACATGCTCTATCGCCAAACC